Insertion junction: CLIP2.073742_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.073742
Chromosome:chromosome 3
Location:8332618
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g199150 (1 of 1) PTHR12126//PTHR12126:SF1 - NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATED // SUBFAMILY NOT NAMED; NAD dependent epimerase/dehydratase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTACCTGAGGCCCCGTGGGCGGGTACGATAATGCTACTGCCCCTCAAAG
Internal bar code:GATACTCGATTAATTATAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:232
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTCGCCGTTGCCTATTT
Suggested primer 2:TTTGGAACATGCAGGCAACG