Insertion junction: CLIP2.073742_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073742
Chromosome:chromosome 6
Location:5529956
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286750 (1 of 2) PF15247 - Histone RNA hairpin-binding protein RNA-binding domain (SLBP_RNA_bind) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGCAAATTTGAGCTGGCCCAGACATGCGTGCGTAGGCCAAATGTGCTT
Internal bar code:TATAGATACCGCGTAGCCATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1928
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:TAGACAACCACAACCTCCGC
Suggested primer 2:CCATTTGGTGCGGTTTGAGG