Insertion junction: CLIP2.073747_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.073747
Chromosome:chromosome 16
Location:666072
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691756 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATCGGTCTAGGGTCAATATGTTGCTCACTTCCTCGTACAGGTCCTCCG
Internal bar code:TGTCGAGAAAGTAATCGTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1170
LEAP-Seq percent confirming:47.8261
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCCGTGTCTACTGTGGC
Suggested primer 2:CTCAGCTGGATGCGGAAGAA