Insertion junction: CLIP2.073748_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073748
Chromosome:chromosome 12
Location:9396068
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541450 gene_edge/mRNA_edge/5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCAATGTTGCACGTCCCTCAGCTCTCCGGATGGGAGAACAGAATCA
Internal bar code:TTGACATGTCCGTGCTCCCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2962
LEAP-Seq percent confirming:94.2308
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GAATGTACACGTGGCGATGC
Suggested primer 2:AGTTCGTCCTCAGGCCAAAG