Insertion junction: CLIP2.073749_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073749
Chromosome:chromosome 6
Location:4673323
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278600 (1 of 1) PF11221 - Subunit 21 of Mediator complex (Med21) 3'UTR
Cre06.g278650 (1 of 1) PTHR11635//PTHR11635:SF127 - CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN // CAMP-DEPENDENT PROTEIN KINASE TYPE II REGULATORY SUBUNIT 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAACCTCCCTAACATCAATGCACCTGATACCGTAAATACTCTTAAGG
Internal bar code:ACCAGAGTGAGACATTCCTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2235
LEAP-Seq percent confirming:47.4576
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGTTGCTATATCAGGGCT
Suggested primer 2:CGCGGGAAACTTTTGCAGAA