Insertion junction: CLIP2.073749_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.073749
Chromosome:chromosome 6
Location:4673331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278600 (1 of 1) PF11221 - Subunit 21 of Mediator complex (Med21) 3'UTR
Cre06.g278650 (1 of 1) PTHR11635//PTHR11635:SF127 - CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN // CAMP-DEPENDENT PROTEIN KINASE TYPE II REGULATORY SUBUNIT 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTTGAAGCGTGTGGAGCCAGAACCTTCAACCCATCATGCCGGAACGCC
Internal bar code:ACCAGAGTGAGACATTCCTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1249
LEAP-Seq percent confirming:97.6744
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGGAAACTTTTGCAGAA
Suggested primer 2:GCGGTTGCTATATCAGGGCT