Insertion junction: CLIP2.073758_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073758
Chromosome:chromosome 16
Location:5806219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCCAAAACAACAAAACCAAGACCCCATCAAGCAATCAGCCCATCAC
Internal bar code:TGTCCGCGTGTCATGTCCCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3854
LEAP-Seq percent confirming:98.9362
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGCTTTGCACACCTGTG
Suggested primer 2:GAAGAGCCGACCTGAGGATG