Insertion junction: CLIP2.073760_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.073760
Chromosome:mitogenome
Location:8017
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreMt.g802342 nad6,801500,ChrepMp06 (1 of 1) K03884 - NADH-ubiquinone oxidoreductase chain 6 (ND6); NADH dehydrogenase subunit 6 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTCCATTTATGTCTTTGATGTATTCTGTTATGCTATTTATCAACTCTT
Internal bar code:ACGCCTCGGGCTGTGCGCCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:174
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCGAGCATCCTATGAG
Suggested primer 2:TGTAGCCCCAATGCACATGT