Insertion junction: CLIP2.073762_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073762
Chromosome:chromosome 1
Location:5459249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038550 SQD2 Sulfoquinovosyldiacylglycerol synthase; (1 of 2) K06119 - sulfoquinovosyltransferase (SQD2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATCAATGTAGTCACCCGTTGACGCTCACAGTCACACATGACTCACGG
Internal bar code:CATCTGCTTCAGTATTGAGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1662
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCGGGTTAGCTGGCTAT
Suggested primer 2:AGCTAAAGAGTTGCCCGTCC