Insertion junction: CLIP2.073769_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073769
Chromosome:chromosome 15
Location:940567
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g639850 NCL6,OPR96 Nuclear Control of chloroplast Like 6, pseudogene; (1 of 45) IPR013584 - RAP domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGCGACTCTATCAAGTTATCTTTCTGATCTATTCAAACGCTACAGGC
Internal bar code:TTGCAGTTTGACCTGTCGTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3169
LEAP-Seq percent confirming:98.8506
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCTTGATGTGCGCTATTG
Suggested primer 2:TGAACGCTGCAAACATGGTG