Insertion junction: CLIP2.073773_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073773
Chromosome:mitogenome
Location:2284
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreMt.g802338 nad4,801494,ChrepMp02 NADH dehydrogenase subunit 4; (1 of 1) K03881 - NADH-ubiquinone oxidoreductase chain 4 (ND4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGAATACGCTAACACAGAACTCTGGTACTACAGGAAGCATGAAACGC
Internal bar code:AGGTGATGGTATCTACGATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1455
LEAP-Seq percent confirming:26.1905
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGCTTCTGGTCACGGTC
Suggested primer 2:CAACACGGTTGAAAGCCCAG