Insertion junction: CLIP2.073775_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073775
Chromosome:chromosome 14
Location:3092864
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g628200 (1 of 1) IPR000719//IPR001245//IPR002290//IPR003018//IPR011009//IPR020635//IPR029016 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // GAF domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // GAF domain-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCCGGGATGTACGGTTAGTCCCCAGTACTAGCACAAAGCAGGCATGC
Internal bar code:GGGAGAATTTACTCTGTGCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2489
LEAP-Seq percent confirming:49.4624
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTACATCGTCGCATGCT
Suggested primer 2:CAATCACACGTTGCAGCCAA