Insertion junction: CLIP2.073782_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073782
Chromosome:chromosome 12
Location:5261664
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527850 TRA1 (1 of 1) PTHR10741//PTHR10741:SF5 - TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X // TRANSLIN-ASSOCIATED PROTEIN X; Translin-like protein outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCCGATTTAGGAAATCGGAGTGCAGCTCGATCCGCGACTCCGATGCAT
Internal bar code:ATCTCTCGTGAAGGACTCTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2165
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCACTTTTCTGCGTCGTT
Suggested primer 2:TTGCAGCATGGTTTGGCTTC