Insertion junction: CLIP2.073785_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073785
Chromosome:chromosome 13
Location:1122246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569400 TAUD1 (1 of 3) PTHR10696 - GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; Similar to conserved hypothetical protein in bacteria 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTAAAGTACAAAAACACTACTTGCTATCGTACAAACCATAAGTAGCTA
Internal bar code:TTTGTCATTGGGGGGCTGGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2422
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCTGTCCTCCCCTCTTC
Suggested primer 2:CCAATTGTTGCGTGTGCTGA