Insertion junction: CLIP2.073789_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073789
Chromosome:chromosome 9
Location:627197
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g800986 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTACGACTGTGCCTGGAAGACGCAAGCACTGCTCCCCGGTTCACACG
Internal bar code:GTCCTATCTTGGATGCCTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1528
LEAP-Seq percent confirming:58.4416
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGAGGGTGATGAGGATGA
Suggested primer 2:CATCCGTTACAGCAACAGCG