Insertion junction: CLIP2.073791_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073791
Chromosome:chromosome 14
Location:4085161
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre14.g633650 PRP6 (1 of 1) PTHR11246:SF1 - PRE-MRNA-PROCESSING FACTOR 6; Splicing factor, component of the U4/U6-U5 snRNP complex CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGCCAGATGGCCTCGCTGCAAGAAGGTTAGGGGGGGATGGGTGTAGG
Internal bar code:ATTATCTTCATTCACCAATTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:227
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCGTTTTGAAGAGTGGTG
Suggested primer 2:GAACTTCTCAAAGGCGGGGA