Insertion junction: CLIP2.073793_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073793
Chromosome:chromosome 1
Location:5032063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034900 CDPK5 (1 of 4) PTHR24347:SF138 - PROTEIN F32D8.1; Calcium/calmodulin-dependent protein kinase 3'UTR
Cre01.g034950 (1 of 1) K06184 - ATP-binding cassette, subfamily F, member 1 (ABCF1); Soluble ABC-F domain containing protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAAGGAAATCATCGTGTCCCTTGCCACGCACGCTCCATCGCTTGCAGC
Internal bar code:CAGTCCGCAGGTGTCAAAAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3692
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCTGACCTGCACTTGTG
Suggested primer 2:GCTGTGTGAGCATATTGCCG