Insertion junction: CLIP2.073800_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.073800
Chromosome:chromosome 14
Location:1483589
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g617500 FAP132,RSP14 Radial Spoke Protein 14; (1 of 1) PTHR15599:SF1 - RHABDOID TUMOR DELETION REGION PROTEIN 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTGGGGTGCTTAACAGCCAGGCGGGTCGGCAAATGAGTGTGTCGCCT
Internal bar code:GCATAGCTTAGGCCGTAAGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1077
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTTCACTTGGTTGGTG
Suggested primer 2:CAGTAATGCCACGATTGCCG