Insertion junction: CLIP2.073803_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073803
Chromosome:chromosome 13
Location:3804482
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre13.g589050 5'UTR
Cre13.g589100 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTTCGGAAAGCCGCGCGACGTTTCGCAATGGTGACGGTATTAGCTTG
Internal bar code:TACAACGGCTCGGGGTAAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:474
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCTGTGTCTTTCCCCTGG
Suggested primer 2:AAGGCGTCCACAAGATCGTT