Insertion junction: CLIP2.073808_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073808
Chromosome:chromosome 10
Location:5621586
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458650 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGATGCGGCCAGTCGTGTCTTGGTGCGATGGCGGTCCAGGTTGGGGGGG
Internal bar code:TGAAGGTACGGTATGTCCAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4064
LEAP-Seq percent confirming:58.5714
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:TATGAACAGCTGCTACGGGC
Suggested primer 2:CTCCAATCCCAATGCGCATG