Insertion junction: CLIP2.073816_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073816
Chromosome:chromosome 12
Location:4777423
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523250 MAE15 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGTCCGCTCCTATTCCTACCTCGCGGTGCGGAGCCACACACCGCAGT
Internal bar code:AAACCACATGGTTGTAAGGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1470
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:GGATACCCACCTGGATGCTG
Suggested primer 2:TGAGGGGCCCATAGCTAAGT