Insertion junction: CLIP2.073825_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073825
Chromosome:chromosome 8
Location:517767
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g359400 gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGCCGGGCGTCTTCACATCGCCCTTTCTCTTGTAAATAGGCGTCAGC
Internal bar code:TAGCTTATATGGTTGATTTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2096
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCTGTGTGTGCAGCTCG
Suggested primer 2:AGTCCGGTAATGTGCAACGT