Insertion junction: CLIP2.073833_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.073833
Chromosome:chromosome 11
Location:1734243
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g801277 (1 of 1) IPR001584//IPR001965//IPR011011//IPR012337//IPR013083 - Integrase, catalytic core // Zinc finger, PHD-type // Zinc finger, FYVE/PHD-type // Ribonuclease H-like domain // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTCTGCCAGAACCAGCGTGAGCATGTCGCCGCCTCCTTATTGGGCAGC
Internal bar code:CTGAATCGTGAGTGGTGTACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:289
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGGACCGACTTACCGTT
Suggested primer 2:CTTGTCCAGTGTAGGCAGGG