Insertion junction: CLIP2.073834_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.073834
Chromosome:chromosome 8
Location:2971945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g374900 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCCTCTGCCCTGACTCGGGCTCGGCCAGTGCTCGCGGTTCTAGCCGG
Internal bar code:CTGACTGGCCCAATCAGATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1301
LEAP-Seq percent confirming:53.3333
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGGCGGGAGAACAAGAG
Suggested primer 2:TCAAACGGGCTCCAGAGAAC