Insertion junction: CLIP2.073837_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073837
Chromosome:chromosome 2
Location:8286463
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g143350 PDE6 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGAGCCGATGGGGGCGGAAAGCACCGGGAGCCGAGGGGGGGGTTAGC
Internal bar code:AGTCGTTAGTGGATCATAAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:990
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCGCTCGCTAGTGTACTC
Suggested primer 2:TCACGACGCATACTCGCTAC