Insertion junction: CLIP2.073839_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073839
Chromosome:chromosome 6
Location:6357792
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293150 PGM12 (1 of 2) PTHR23029:SF12 - PHOSPHOMUTASE PMU1-RELATED; Phosphoglycerate mutase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGCCAAAACGCGCGGGATCTTGGGGGTTTTTTCGGCAAACAGACGAA
Internal bar code:TCTTGGAGTCGATATGAACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2954
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTCCACACGCAACAAAG
Suggested primer 2:CTCTTGCTGCTGGGGATGAA