Insertion junction: CLIP2.073849_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073849
Chromosome:chromosome 3
Location:3190211
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165100 PSAI1 (1 of 1) K02696 - photosystem I subunit VIII (psaI); Photosystem I reaction center subunit PsaI 5'UTR
Cre03.g165150 (1 of 31) IPR003594 - Histidine kinase-like ATPase, C-terminal domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTGTTATTGGCTCTGGCGTTGTGCCGCAGCATGTCAAAGGCGATGGGG
Internal bar code:AGCTTGTAAGTGGCTTGGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4085
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGCAGAACAAGGGAAGAG
Suggested primer 2:GACATGCCCTGACCTCTCAC