Insertion junction: CLIP2.073850_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073850
Chromosome:chromosome 5
Location:2586042
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g239700 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGTTGTTTTATGTCAGCTTGGGTCGCGGGGCCAAAATGGCCCTTCGC
Internal bar code:TATTCGTAGCGGTACTGTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2405
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTGTGGCAGGATGGATG
Suggested primer 2:GTTGCAAGGTGGTCAGCAAG