Insertion junction: CLIP2.073861_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.073861
Chromosome:chromosome 3
Location:9205633
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g199199 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCGTGCCGGATGTTGGTTCCGGAGTTGACGTCACGTCCCTGCACCGT
Internal bar code:TGGTTAATTTTAAAGTGACAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1831
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTGTACGTGGACGAGTT
Suggested primer 2:GCCAAACCAGGTGCCTATCT