Insertion junction: CLIP2.073863_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.073863
Chromosome:chromosome 16
Location:7377938
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680117 (1 of 1) K15692 - E3 ubiquitin-protein ligase RNF13 [EC:6.3.2.19] (RNF13, RZF) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACGAGTTTAAGGTGAAGCGTTCCGGCTGTGTTGGACGCGGCTGACTCG
Internal bar code:ACTTACATTCCGAAAACGCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:802
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGCGCCAATGTGTCTAAT
Suggested primer 2:TCATACCAACGAGCCCCCTA