Insertion junction: CLIP2.073865_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073865
Chromosome:chromosome 12
Location:1580645
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487250 (1 of 1) PF06454 - Protein of unknown function (DUF1084) (DUF1084) 3'UTR
Cre12.g801367 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTATTCTATACGTTTTGCCGACGCACGCAGCCACCAGCCACGGATGGG
Internal bar code:AGTAATGGGAGTGGATCGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:327
LEAP-Seq percent confirming:9.67742
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGGCATAAGTAGGAGGAC
Suggested primer 2:ACCAGGAAGAAAGAGGCGTG