Insertion junction: CLIP2.073866_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073866
Chromosome:chromosome 6
Location:5789577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g288950 (1 of 33) IPR013763 - Cyclin-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCACCTTCAAGCATGGCCAAAAGGCCGCATCGCATGAAGCGTCACCC
Internal bar code:CTTTGTAATTTATTAGCCCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5432
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAGGGTAGGCCGTTAGCT
Suggested primer 2:TAAGTGCCTTGCCCTGTAGC