Insertion junction: CLIP2.073872_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073872
Chromosome:chromosome 14
Location:2327293
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre14.g622900 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCGATGGCGCTGACTCCCTCCAGCCCCGCGCGAGCCCCCCGTCCGGG
Internal bar code:GCGTGGGGGAGCGGATGTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:376
LEAP-Seq percent confirming:14.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTTACTCCCAGCTTTGGC
Suggested primer 2:CGATGATGCCGAAAGTGCAG