Insertion junction: CLIP2.073874_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073874
Chromosome:plastome
Location:13244
Confidence (%):40
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGGAATTCGAATCCGCGTTTTCTCCGTGAAAGGGAGGTGTCCTAGGCC
Internal bar code:GTTGTCGGATATGGGTATGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:109
LEAP-Seq percent confirming:6.25
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTAACGGACGTCCCCTTTGG
Suggested primer 2:AACAACAGAAGAGCTCGGGG