Insertion junction: CLIP2.073878_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.073878
Chromosome:chromosome 12
Location:3145189
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500650 RNB2 (1 of 1) PTHR23355//PTHR23355:SF39 - RIBONUCLEASE // SUBFAMILY NOT NAMED; chloroplast RNase II 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGAGTCTCCGACCTTCAGCCCTTCCATCCTGCAAACTAGCCGTGCGC
Internal bar code:TTTCGTCGATTTATATCGTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:537
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGGTTGTGGTCAAAGTG
Suggested primer 2:TGCACTCACGAGGTTCACTC