Insertion junction: CLIP2.073878_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073878
Chromosome:chromosome 12
Location:3145199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500650 RNB2 (1 of 1) PTHR23355//PTHR23355:SF39 - RIBONUCLEASE // SUBFAMILY NOT NAMED; chloroplast RNase II 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTCGGAGGGGGCCAGGGGCCAAGGTGGCGGAGTGATGGTCCGCGCTGA
Internal bar code:GGTCCCGACGTTCTGTATTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3152
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACTCACGAGGTTCACTC
Suggested primer 2:CGCAGGTTGTGGTCAAAGTG