Insertion junction: CLIP2.073879_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.073879
Chromosome:chromosome 6
Location:4742260
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g279450 MUT68 (1 of 7) PTHR11584//PTHR11584:SF381 - SERINE/THREONINE PROTEIN KINASE // PROTEIN PQN-80, ISOFORM B; protein kinase 5'UTR_intron
Cre06.g800693 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCATGGGGCAGGTGAACGGTTGAACCAGGGCCGGGGCCTTAGGGCTCA
Internal bar code:GTGACTGGACTCACGGCTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:133
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGCCCTACCTCTCACAC
Suggested primer 2:GACAGGCACGTTTTGAGCTG