Insertion junction: CLIP2.073888_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073888
Chromosome:chromosome 7
Location:3638371
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g337250 (1 of 110) 3.4.19.12 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAACCTGCGCGCACTGCTGCACCGCATTGTCCTTGTCCGAACACCATA
Internal bar code:CCCGCCGCGGGAGCCGGGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:801
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATCAGATGGTGCATGTG
Suggested primer 2:GAGTATGTAGCGCGTCGACA