Insertion junction: CLIP2.073889_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073889
Chromosome:chromosome 8
Location:4055862
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382800 CDPK13 (1 of 1) PF00036//PF07714//PF13499 - EF hand (EF-hand_1) // Protein tyrosine kinase (Pkinase_Tyr) // EF-hand domain pair (EF-hand_7); Calcium/calmodulin-dependent protein kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCCAGTGCAACGGCCGTGCCGTGCCAGGGTGCACCCGACATTCGGCC
Internal bar code:CTTGCGAGGACGCAGGGAGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2878
LEAP-Seq percent confirming:36.6337
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:64
LEAP-Seq n unique pos:101

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGGTGGCTCTCATTTCTT
Suggested primer 2:GCTGTGCCCTTCATTTTGGG