Insertion junction: CLIP2.073893_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073893
Chromosome:chromosome 3
Location:8672367
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g209393 (1 of 2) K05894 - 12-oxophytodienoic acid reductase (OPR) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGAACAAGGCAGAAAGGCCCGAAAGAATGTGCAAACCACCTTGTACAC
Internal bar code:TAAGGCACGCACAGCTATTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:723
LEAP-Seq percent confirming:58.8235
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGCGTGTGTGTGTCTTG
Suggested primer 2:AGCAAGAGGTAGCCAGCAAG