Insertion junction: CLIP2.073902_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073902
Chromosome:chromosome 17
Location:3558676
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802069 (1 of 1) PF16100 - RecQ-mediated genome instability protein 2 (RMI2) 3'UTR
lncRNA_TCONS_00163178 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTAATCAACGCTGCGCCTGATTCGGAGCAGGTCTTGCTGCTCGTAAA
Internal bar code:TTTACCCATAAAGTTAAGACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3004
LEAP-Seq percent confirming:61.1111
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCAAGACCAGGCAAGACT
Suggested primer 2:AGTATGTCTTGCTGGTGGGC