Insertion junction: CLIP2.073911_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.073911
Chromosome:chromosome 16
Location:1499823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653000 (1 of 1) K18404 - tudor domain-containing protein 3 (TDRD3) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGCCAGCAACTTGCCGCCAGGTCTTGCTGTAAACTTTGCTATCGCAA
Internal bar code:GGTTTAGACCATAGCTTAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2076
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTGAGACACGCACTGAC
Suggested primer 2:GCCATGTCCCATGTCCTCAA