Insertion junction: CLIP2.073915_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073915
Chromosome:chromosome 9
Location:897948
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g403300 (1 of 1) K03144 - transcription initiation factor TFIIH subunit 4 (TFIIH4, GTF2H4, TFB2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGGGTTGAGCCCTGACGCAGCCGTTGATGCAACAACGCAATCATGGGC
Internal bar code:AGGGGGGCACCCCGGCCGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:394
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCCCTTATCGCACACACA
Suggested primer 2:GACGTCCTTACAGAGGTGGC