Insertion junction: CLIP2.073930_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.073930
Chromosome:chromosome 7
Location:2115831
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g326400 (1 of 1) PTHR21236:SF1 - PROTEIN YIPF6 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGACAGATAGCCAGGGTTAACTGCCAGCGGTAAGCTTGACGATGGGG
Internal bar code:TTAACGAGTTTTGCGCTCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2701
LEAP-Seq percent confirming:98.7654
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:GAACATCGTCTTCGCCAACG
Suggested primer 2:TATCGCGCCAGATGGTCTTC