Insertion junction: CLIP2.073933_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073933
Chromosome:chromosome 10
Location:4753762
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g452600 (1 of 1) PTHR33911:SF1 - RRNA-PROCESSING PROTEIN EFG1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAATGGTTAATGGGCACTGATGAAGCTTACCCGAAAGGGCAGTACAGTT
Internal bar code:CACTTTGTATGCACTTGGTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1345
LEAP-Seq percent confirming:36.25
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGGCCTGACAAGAACTC
Suggested primer 2:GGGGTCGTCTGTTATGTGCA