Insertion junction: CLIP2.073949_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073949
Chromosome:chromosome 9
Location:5758803
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410850 NAR3,NRT2A High affinity nitrate/nitrite transporter; (1 of 4) K02575 - MFS transporter, NNP family, nitrate/nitrite transporter (NRT, narK, nrtP, nasA) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTATAACGCCGTCTGGCTCATGCGGAAGTCGGGCAGGCTCATGCGGG
Internal bar code:GGGCGCTTATCCTTATCGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3349
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCATGCAAAGAGGATGCG
Suggested primer 2:AAAGGCTGAAGCGTTGCAAG