Insertion junction: CLIP2.073978_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073978
Chromosome:chromosome 3
Location:9113954
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200879 CSR10 Carbohydrate sulfotransferase-related 10; (1 of 1) IPR000104//IPR000863//IPR012884//IPR027417 - Antifreeze protein, type I // Sulfotransferase domain // Excisionase-like // P-loop containing nucleoside triphosphate hydrolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGATTGCTGTTGCCCTTCATGCCCCCTTAAGCGCTCAGGATAATCACAG
Internal bar code:TTGTCGTTTAAGTCTATGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:408
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TACCTCAAAAGTGCCCACCC
Suggested primer 2:TAATAGCTACCTGGTGCGCG