Insertion junction: CLIP2.073978_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073978
Chromosome:chromosome 3
Location:9113960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200879 CSR10 Carbohydrate sulfotransferase-related 10; (1 of 1) IPR000104//IPR000863//IPR012884//IPR027417 - Antifreeze protein, type I // Sulfotransferase domain // Excisionase-like // P-loop containing nucleoside triphosphate hydrolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCATCGTCAGACATACGCAGTTCGCAGTGTCAGTCTGACAAGCGTGT
Internal bar code:ACTTTGGGTGGCGGTTTACTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1584
LEAP-Seq percent confirming:96.6102
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TAATAGCTACCTGGTGCGCG
Suggested primer 2:TACCTCAAAAGTGCCCACCC