Insertion junction: CLIP2.073979_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073979
Chromosome:plastome
Location:101822
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802308 ChreCp044,2716995,psbL photosystem II reaction center subunit XII; (1 of 1) K02713 - photosystem II PsbL protein (psbL) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGTAATCAATTTTCTTGCCCAAAAGCTGCAGGCAGTTCTAAAAAAGTC
Internal bar code:GGTGTTTCAATTCGACGTTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:178
LEAP-Seq percent confirming:9.00901
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:101
LEAP-Seq n unique pos:111

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCTGTGGCTGTAGATAT
Suggested primer 2:TTACTTAGGACGGCAGTGGC