Insertion junction: CLIP2.073980_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073980
Chromosome:chromosome 3
Location:5637369
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186200 CDS1,PCT1 Phosphatidate cytidylyltransferase; (1 of 1) PTHR13773:SF8 - PHOSPHATIDATE CYTIDYLYLTRANSFERASE, PHOTORECEPTOR-SPECIFIC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCAAACTTAGCTATGCATTCCTTGTTTTGACTGCGAGCTCATCACGAA
Internal bar code:CGGGCACCAGTTGACGCAAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2190
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTAGGCGATGCGGAAGAG
Suggested primer 2:CCGCCATGGCTAACGACTAT